STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEJ95559.1Hydrogenase nickel incorporation protein HypB. (225 aa)    
Predicted Functional Partners:
SEJ28362.1
Hydrogenase expression/formation protein HypD.
 
  
 0.997
hypA-2
Hydrogenase nickel incorporation protein HypA/HybF; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.
 
 0.997
SEJ95523.1
Hydrogenase expression/formation protein HypC.
 
  
 0.987
hypA
Hydrogenase nickel incorporation protein HypA/HybF; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.
 
 0.986
SEJ95509.1
Hydrogenase expression/formation protein HypD.
 
  
 0.986
SEJ55222.1
Ni,Fe-hydrogenase III large subunit.
   
 
 0.977
SEJ95498.1
Hydrogenase expression/formation protein HypE.
 
  
 0.975
SEJ95535.1
Hydrogenase maturation protein HypF.
 
   
 0.969
SEJ95545.1
Hydrogenase maturation protease.
 
  
 0.951
SEJ95627.1
Hydrogenase small subunit.
 
  
 0.932
Your Current Organism:
Propionispira arboris
NCBI taxonomy Id: 84035
Other names: ATCC 33732, DSM 2179, P. arboris, strain 12B4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.