Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CJ218_03000 | CJ218_03005 | GCA_001052115_00115 | GCA_001052115_00116 | Unannotated protein. | Unannotated protein. | 0.567 |
CJ218_03000 | CJ218_05915 | GCA_001052115_00115 | GCA_001052115_01177 | Unannotated protein. | Unannotated protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.502 |
CJ218_03000 | CJ218_06655 | GCA_001052115_00115 | GCA_001052115_00605 | Unannotated protein. | Unannotated protein. | 0.586 |
CJ218_03000 | CJ218_08355 | GCA_001052115_00115 | GCA_001052115_00862 | Unannotated protein. | Unannotated protein. | 0.460 |
CJ218_03000 | CJ218_08440 | GCA_001052115_00115 | GCA_001052115_01266 | Unannotated protein. | Unannotated protein. | 0.508 |
CJ218_03000 | glyA | GCA_001052115_00115 | GCA_001052115_00093 | Unannotated protein. | Unannotated protein; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.499 |
CJ218_03000 | rnmV | GCA_001052115_00115 | GCA_001052115_00854 | Unannotated protein. | Unannotated protein; Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step. | 0.411 |
CJ218_03005 | CJ218_03000 | GCA_001052115_00116 | GCA_001052115_00115 | Unannotated protein. | Unannotated protein. | 0.567 |
CJ218_05915 | CJ218_03000 | GCA_001052115_01177 | GCA_001052115_00115 | Unannotated protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Unannotated protein. | 0.502 |
CJ218_05915 | CJ218_08355 | GCA_001052115_01177 | GCA_001052115_00862 | Unannotated protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Unannotated protein. | 0.516 |
CJ218_05915 | CJ218_08440 | GCA_001052115_01177 | GCA_001052115_01266 | Unannotated protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Unannotated protein. | 0.798 |
CJ218_05915 | glyA | GCA_001052115_01177 | GCA_001052115_00093 | Unannotated protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Unannotated protein; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.528 |
CJ218_06655 | CJ218_03000 | GCA_001052115_00605 | GCA_001052115_00115 | Unannotated protein. | Unannotated protein. | 0.586 |
CJ218_08355 | CJ218_03000 | GCA_001052115_00862 | GCA_001052115_00115 | Unannotated protein. | Unannotated protein. | 0.460 |
CJ218_08355 | CJ218_05915 | GCA_001052115_00862 | GCA_001052115_01177 | Unannotated protein. | Unannotated protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.516 |
CJ218_08355 | CJ218_08440 | GCA_001052115_00862 | GCA_001052115_01266 | Unannotated protein. | Unannotated protein. | 0.590 |
CJ218_08355 | glyA | GCA_001052115_00862 | GCA_001052115_00093 | Unannotated protein. | Unannotated protein; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.432 |
CJ218_08440 | CJ218_03000 | GCA_001052115_01266 | GCA_001052115_00115 | Unannotated protein. | Unannotated protein. | 0.508 |
CJ218_08440 | CJ218_05915 | GCA_001052115_01266 | GCA_001052115_01177 | Unannotated protein. | Unannotated protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.798 |
CJ218_08440 | CJ218_08355 | GCA_001052115_01266 | GCA_001052115_00862 | Unannotated protein. | Unannotated protein. | 0.590 |
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