Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CJ218_04730 | CJ218_05625 | GCA_001052115_00839 | GCA_001052115_01158 | Unannotated protein. | Unannotated protein. | 0.611 |
CJ218_04730 | CJ218_06280 | GCA_001052115_00839 | GCA_001052115_00408 | Unannotated protein. | Unannotated protein. | 0.597 |
CJ218_04730 | dnaK | GCA_001052115_00839 | GCA_001052115_00130 | Unannotated protein. | Unannotated protein; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.641 |
CJ218_04730 | glpK | GCA_001052115_00839 | GCA_001052115_01419 | Unannotated protein. | Unannotated protein; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family. | 0.756 |
CJ218_04730 | guaB | GCA_001052115_00839 | GCA_001052115_00616 | Unannotated protein. | Unannotated protein; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.546 |
CJ218_04730 | lon | GCA_001052115_00839 | GCA_001052115_00258 | Unannotated protein. | Unannotated protein. | 0.579 |
CJ218_04730 | rplK | GCA_001052115_00839 | GCA_001052115_01698 | Unannotated protein. | Unannotated protein; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.538 |
CJ218_04730 | rplT | GCA_001052115_00839 | GCA_001052115_01138 | Unannotated protein. | Unannotated protein; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.529 |
CJ218_04730 | rpsF | GCA_001052115_00839 | GCA_001052115_00564 | Unannotated protein. | Unannotated protein; Binds together with S18 to 16S ribosomal RNA. | 0.575 |
CJ218_04730 | rseP | GCA_001052115_00839 | GCA_001052115_00942 | Unannotated protein. | Unannotated protein. | 0.571 |
CJ218_05625 | CJ218_04730 | GCA_001052115_01158 | GCA_001052115_00839 | Unannotated protein. | Unannotated protein. | 0.611 |
CJ218_06280 | CJ218_04730 | GCA_001052115_00408 | GCA_001052115_00839 | Unannotated protein. | Unannotated protein. | 0.597 |
CJ218_06280 | glpK | GCA_001052115_00408 | GCA_001052115_01419 | Unannotated protein. | Unannotated protein; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family. | 0.639 |
dnaK | CJ218_04730 | GCA_001052115_00130 | GCA_001052115_00839 | Unannotated protein; Acts as a chaperone; Belongs to the heat shock protein 70 family. | Unannotated protein. | 0.641 |
dnaK | glpK | GCA_001052115_00130 | GCA_001052115_01419 | Unannotated protein; Acts as a chaperone; Belongs to the heat shock protein 70 family. | Unannotated protein; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family. | 0.483 |
dnaK | guaB | GCA_001052115_00130 | GCA_001052115_00616 | Unannotated protein; Acts as a chaperone; Belongs to the heat shock protein 70 family. | Unannotated protein; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.639 |
dnaK | lon | GCA_001052115_00130 | GCA_001052115_00258 | Unannotated protein; Acts as a chaperone; Belongs to the heat shock protein 70 family. | Unannotated protein. | 0.726 |
dnaK | rplK | GCA_001052115_00130 | GCA_001052115_01698 | Unannotated protein; Acts as a chaperone; Belongs to the heat shock protein 70 family. | Unannotated protein; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.724 |
glpK | CJ218_04730 | GCA_001052115_01419 | GCA_001052115_00839 | Unannotated protein; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family. | Unannotated protein. | 0.756 |
glpK | CJ218_06280 | GCA_001052115_01419 | GCA_001052115_00408 | Unannotated protein; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family. | Unannotated protein. | 0.639 |
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