Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CJ218_01590 | coaBC | GCA_001052115_01720 | GCA_001052115_00284 | Unannotated protein; Belongs to the ribF family. | Unannotated protein; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family. | 0.511 |
CJ218_01590 | coaD | GCA_001052115_01720 | GCA_001052115_00929 | Unannotated protein; Belongs to the ribF family. | Unannotated protein; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family. | 0.703 |
CJ218_01590 | coaE | GCA_001052115_01720 | GCA_001052115_01253 | Unannotated protein; Belongs to the ribF family. | Unannotated protein; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family. | 0.440 |
CJ218_01590 | guaA | GCA_001052115_01720 | GCA_001052115_01277 | Unannotated protein; Belongs to the ribF family. | Unannotated protein; Catalyzes the synthesis of GMP from XMP. | 0.423 |
CJ218_07220 | CJ218_07225 | GCA_001052115_00932 | GCA_001052115_00931 | Unannotated protein. | Unannotated protein. | 0.781 |
CJ218_07220 | PanF | GCA_001052115_00932 | GCA_001052115_00933 | Unannotated protein. | Unannotated protein; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.946 |
CJ218_07220 | coaD | GCA_001052115_00932 | GCA_001052115_00929 | Unannotated protein. | Unannotated protein; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family. | 0.781 |
CJ218_07220 | murG | GCA_001052115_00932 | GCA_001052115_00930 | Unannotated protein. | Unannotated protein; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily. | 0.781 |
CJ218_07220 | rsmD | GCA_001052115_00932 | GCA_001052115_00928 | Unannotated protein. | Unannotated protein. | 0.781 |
CJ218_07225 | CJ218_07220 | GCA_001052115_00931 | GCA_001052115_00932 | Unannotated protein. | Unannotated protein. | 0.781 |
CJ218_07225 | PanF | GCA_001052115_00931 | GCA_001052115_00933 | Unannotated protein. | Unannotated protein; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.790 |
CJ218_07225 | coaD | GCA_001052115_00931 | GCA_001052115_00929 | Unannotated protein. | Unannotated protein; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family. | 0.787 |
CJ218_07225 | murG | GCA_001052115_00931 | GCA_001052115_00930 | Unannotated protein. | Unannotated protein; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily. | 0.799 |
CJ218_07225 | rsmD | GCA_001052115_00931 | GCA_001052115_00928 | Unannotated protein. | Unannotated protein. | 0.781 |
PanF | CJ218_07220 | GCA_001052115_00933 | GCA_001052115_00932 | Unannotated protein; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | Unannotated protein. | 0.946 |
PanF | CJ218_07225 | GCA_001052115_00933 | GCA_001052115_00931 | Unannotated protein; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | Unannotated protein. | 0.790 |
PanF | coaD | GCA_001052115_00933 | GCA_001052115_00929 | Unannotated protein; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | Unannotated protein; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family. | 0.781 |
PanF | murG | GCA_001052115_00933 | GCA_001052115_00930 | Unannotated protein; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | Unannotated protein; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily. | 0.781 |
PanF | rsmD | GCA_001052115_00933 | GCA_001052115_00928 | Unannotated protein; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | Unannotated protein. | 0.781 |
coaBC | CJ218_01590 | GCA_001052115_00284 | GCA_001052115_01720 | Unannotated protein; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family. | Unannotated protein; Belongs to the ribF family. | 0.511 |
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