Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CJ218_01570 | CJ218_01580 | GCA_001052115_01724 | GCA_001052115_01722 | Unannotated protein. | Unannotated protein; Belongs to the Fur family. | 0.748 |
CJ218_01570 | CJ218_01590 | GCA_001052115_01724 | GCA_001052115_01720 | Unannotated protein. | Unannotated protein; Belongs to the ribF family. | 0.719 |
CJ218_01570 | guaB | GCA_001052115_01724 | GCA_001052115_00616 | Unannotated protein. | Unannotated protein; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.624 |
CJ218_01570 | nfo | GCA_001052115_01724 | GCA_001052115_01723 | Unannotated protein. | Unannotated protein; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin. | 0.837 |
CJ218_01570 | rpsO | GCA_001052115_01724 | GCA_001052115_01719 | Unannotated protein. | Unannotated protein; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.773 |
CJ218_01570 | truB | GCA_001052115_01724 | GCA_001052115_01721 | Unannotated protein. | Unannotated protein; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | 0.884 |
CJ218_01580 | CJ218_01570 | GCA_001052115_01722 | GCA_001052115_01724 | Unannotated protein; Belongs to the Fur family. | Unannotated protein. | 0.748 |
CJ218_01580 | CJ218_01590 | GCA_001052115_01722 | GCA_001052115_01720 | Unannotated protein; Belongs to the Fur family. | Unannotated protein; Belongs to the ribF family. | 0.746 |
CJ218_01580 | nfo | GCA_001052115_01722 | GCA_001052115_01723 | Unannotated protein; Belongs to the Fur family. | Unannotated protein; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin. | 0.762 |
CJ218_01580 | rpsO | GCA_001052115_01722 | GCA_001052115_01719 | Unannotated protein; Belongs to the Fur family. | Unannotated protein; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.490 |
CJ218_01580 | truB | GCA_001052115_01722 | GCA_001052115_01721 | Unannotated protein; Belongs to the Fur family. | Unannotated protein; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | 0.781 |
CJ218_01590 | CJ218_01570 | GCA_001052115_01720 | GCA_001052115_01724 | Unannotated protein; Belongs to the ribF family. | Unannotated protein. | 0.719 |
CJ218_01590 | CJ218_01580 | GCA_001052115_01720 | GCA_001052115_01722 | Unannotated protein; Belongs to the ribF family. | Unannotated protein; Belongs to the Fur family. | 0.746 |
CJ218_01590 | CJ218_07630 | GCA_001052115_01720 | GCA_001052115_00418 | Unannotated protein; Belongs to the ribF family. | Unannotated protein; Belongs to the flavin oxidoreductase frp family. | 0.905 |
CJ218_01590 | cmk | GCA_001052115_01720 | GCA_001052115_00236 | Unannotated protein; Belongs to the ribF family. | Unannotated protein. | 0.741 |
CJ218_01590 | coaD | GCA_001052115_01720 | GCA_001052115_00929 | Unannotated protein; Belongs to the ribF family. | Unannotated protein; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family. | 0.703 |
CJ218_01590 | guaB | GCA_001052115_01720 | GCA_001052115_00616 | Unannotated protein; Belongs to the ribF family. | Unannotated protein; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.604 |
CJ218_01590 | mnmA | GCA_001052115_01720 | GCA_001052115_01120 | Unannotated protein; Belongs to the ribF family. | Unannotated protein; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34. | 0.739 |
CJ218_01590 | nfo | GCA_001052115_01720 | GCA_001052115_01723 | Unannotated protein; Belongs to the ribF family. | Unannotated protein; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin. | 0.715 |
CJ218_01590 | rpsO | GCA_001052115_01720 | GCA_001052115_01719 | Unannotated protein; Belongs to the ribF family. | Unannotated protein; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.604 |
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