STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ANG84674.1Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (236 aa)    
Predicted Functional Partners:
ANG84673.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.965
ANG84934.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.850
ANG86635.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.849
ANG84335.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.828
ANG84927.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.799
ANG84825.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 0.770
ANG86579.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.538
ANG85050.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.505
ANG84672.1
Phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.492
ANG84671.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.457
Your Current Organism:
Microbacterium chocolatum
NCBI taxonomy Id: 84292
Other names: BUCSAV 207, CIP 105729, Chromobacterium chocolatum, DSM 12507, IFO 3758, JCM 12412, M. chocolatum, NBRC 3758, NCIB 8181, NCIB:8181, NCIMB 8181, VKM Ac-2078
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