STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANG85408.1Macrolide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (223 aa)    
Predicted Functional Partners:
ANG85409.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.981
ANG85356.1
Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
0.886
ANG86048.1
Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
0.883
ANG86695.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.860
ANG85150.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
0.854
ANG84741.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  
  0.766
ANG86392.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
0.651
ANG85407.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.649
ANG85733.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.620
A8L33_14730
NAD(P)-dependent oxidoreductase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
0.609
Your Current Organism:
Microbacterium chocolatum
NCBI taxonomy Id: 84292
Other names: BUCSAV 207, CIP 105729, Chromobacterium chocolatum, DSM 12507, IFO 3758, JCM 12412, M. chocolatum, NBRC 3758, NCIB 8181, NCIB:8181, NCIMB 8181, VKM Ac-2078
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.