STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sepFCell division protein SepF; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA. (153 aa)    
Predicted Functional Partners:
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
  
 
 0.985
ANG85543.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.948
ANG86709.1
YggS family pyridoxal phosphate enzyme; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.927
ANG85540.1
Cell division protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.874
ANG85544.1
Cell division protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.859
ANG84623.1
DNA replication/repair protein RecF; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.667
ANG86708.1
Cell division protein FtsW; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SEDS family.
     
 0.645
murC
UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
     
 0.641
ANG84255.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.612
ANG85546.1
RNA pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.
       0.587
Your Current Organism:
Microbacterium chocolatum
NCBI taxonomy Id: 84292
Other names: BUCSAV 207, CIP 105729, Chromobacterium chocolatum, DSM 12507, IFO 3758, JCM 12412, M. chocolatum, NBRC 3758, NCIB 8181, NCIB:8181, NCIMB 8181, VKM Ac-2078
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