STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900162615_00779Unannotated protein. (899 aa)    
Predicted Functional Partners:
GCA_900162615_00781
Unannotated protein.
 
  
 0.821
GCA_900162615_02268
Unannotated protein.
  
    0.812
GCA_900162615_00782
Unannotated protein.
 
  
 0.810
GCA_900162615_03537
Unannotated protein.
  
 
 0.804
GCA_900162615_03515
Unannotated protein.
     
 0.758
GCA_900162615_00449
Unannotated protein.
    
 0.747
GCA_900162615_01574
Unannotated protein.
    
 0.747
GCA_900162615_02448
Unannotated protein.
    
 0.747
GCA_900162615_03135
Unannotated protein.
    
 0.747
GCA_900162615_03163
Unannotated protein.
    
 0.747
Your Current Organism:
Virgibacillus proomii
NCBI taxonomy Id: 84407
Other names: CIP 106304, DSM 13055, LMG 12370, LMG:12370, V. proomii, strain BO413, strain F 2737/77
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.