STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900162615_00822Unannotated protein. (238 aa)    
Predicted Functional Partners:
GCA_900162615_02272
Unannotated protein.
  
    0.700
GCA_900162615_00445
Unannotated protein.
  
    0.556
GCA_900162615_00821
Unannotated protein.
       0.518
GCA_900162615_00910
Unannotated protein.
 
  
 0.450
GCA_900162615_00824
Unannotated protein.
  
  
 0.426
GCA_900162615_00741
Unannotated protein.
   
    0.407
GCA_900162615_00981
Unannotated protein.
   
    0.407
Your Current Organism:
Virgibacillus proomii
NCBI taxonomy Id: 84407
Other names: CIP 106304, DSM 13055, LMG 12370, LMG:12370, V. proomii, strain BO413, strain F 2737/77
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.