STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900162615_02062Unannotated protein. (64 aa)    
Predicted Functional Partners:
GCA_900162615_02061
Unannotated protein.
 
     0.735
GCA_900162615_01926
Unannotated protein.
  
     0.683
GCA_900162615_01027
Unannotated protein.
  
     0.676
GCA_900162615_02102
Unannotated protein.
  
     0.615
GCA_900162615_01641
Unannotated protein.
  
     0.612
GCA_900162615_02069
Unannotated protein.
 
     0.606
GCA_900162615_02721
Unannotated protein.
  
     0.582
GCA_900162615_01942
Unannotated protein.
  
     0.565
GCA_900162615_01881
Unannotated protein.
  
     0.564
GCA_900162615_01392
Unannotated protein.
  
     0.553
Your Current Organism:
Virgibacillus proomii
NCBI taxonomy Id: 84407
Other names: CIP 106304, DSM 13055, LMG 12370, LMG:12370, V. proomii, strain BO413, strain F 2737/77
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.