STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900162615_02399Unannotated protein. (328 aa)    
Predicted Functional Partners:
GCA_900162615_03656
Unannotated protein.
    
 0.868
GCA_900162615_02219
Unannotated protein.
 0.663
GCA_900162615_02954
Unannotated protein.
    
 0.633
GCA_900162615_00293
Unannotated protein.
  
 
 0.616
GCA_900162615_03909
Unannotated protein.
  
 
 0.616
GCA_900162615_01381
Unannotated protein.
    
 0.555
GCA_900162615_02398
Unannotated protein.
    
 0.540
GCA_900162615_01680
Unannotated protein.
    
 0.537
GCA_900162615_00490
Unannotated protein.
  
 0.523
GCA_900162615_01160
Unannotated protein.
  
 0.523
Your Current Organism:
Virgibacillus proomii
NCBI taxonomy Id: 84407
Other names: CIP 106304, DSM 13055, LMG 12370, LMG:12370, V. proomii, strain BO413, strain F 2737/77
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.