STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI37032.1Uncharacterized protein YpuA, DUF1002 family. (807 aa)    
Predicted Functional Partners:
SDI58995.1
Beta-lactamase enzyme family protein.
  
     0.717
SDI36815.1
Beta-lactamase class A.
  
     0.635
SDI62986.1
Hypothetical protein.
  
     0.592
SDI59150.1
Protein involved in sex pheromone biosynthesis.
  
     0.578
SDI75066.1
Uncharacterized protein YhaN.
  
     0.574
SDI68856.1
Predicted ABC-type exoprotein transport system, permease component.
  
     0.572
SDI38903.1
Peptidase_C39 like family protein.
  
     0.562
mreD
Rod shape-determining protein MreD.
  
     0.554
SDI31972.1
Penicillin-binding protein 2B.
  
     0.552
SDI49850.1
Uncharacterized membrane protein, required for colicin V production.
  
     0.526
Your Current Organism:
Dolosicoccus paucivorans
NCBI taxonomy Id: 84521
Other names: ATCC BAA-56, CCUG 39307, CIP 106314, D. paucivorans, DSM 15742, Streptococcus sp. 2992-95, strain 2992-95
Server load: low (26%) [HD]