STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI36815.1Beta-lactamase class A. (565 aa)    
Predicted Functional Partners:
SDI38903.1
Peptidase_C39 like family protein.
 
 
  0.830
SDI58995.1
Beta-lactamase enzyme family protein.
  
  
  0.826
SDI36849.1
Hypothetical protein.
       0.774
mreD
Rod shape-determining protein MreD.
  
     0.709
SDI81360.1
Alpha/beta hydrolase fold.
  
     0.694
SDI62986.1
Hypothetical protein.
  
     0.676
SDI64120.1
Hypothetical protein.
  
     0.645
SDI37032.1
Uncharacterized protein YpuA, DUF1002 family.
  
     0.635
SDI78023.1
Beta-lactamase enzyme family protein.
  
     0.624
SDI72219.1
Two-component signal transduction system YycFG, regulatory protein YycH.
  
     0.618
Your Current Organism:
Dolosicoccus paucivorans
NCBI taxonomy Id: 84521
Other names: ATCC BAA-56, CCUG 39307, CIP 106314, D. paucivorans, DSM 15742, Streptococcus sp. 2992-95, strain 2992-95
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.