STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI48616.1LysM domain-containing protein. (229 aa)    
Predicted Functional Partners:
SDI30706.1
N-acetylmuramoyl-L-alanine amidase.
 
  
 0.849
cinA
Nicotinamide-nucleotide amidase; Belongs to the CinA family.
  
 
  0.844
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
    
 0.840
guaB
IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
  0.815
cmk
Cytidylate kinase.
  
 
  0.758
SDI70423.1
Putative adhesin.
  
 
   0.746
SDI48565.1
Small subunit ribosomal protein S1.
 
    0.589
SDI63842.1
Putative peptidoglycan binding domain-containing protein.
  
     0.570
SDI59293.1
Putative peptidoglycan binding domain-containing protein.
  
     0.514
SDI31947.1
Uncharacterized membrane protein YfhO.
  
     0.499
Your Current Organism:
Dolosicoccus paucivorans
NCBI taxonomy Id: 84521
Other names: ATCC BAA-56, CCUG 39307, CIP 106314, D. paucivorans, DSM 15742, Streptococcus sp. 2992-95, strain 2992-95
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.