STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sufCIron-regulated ABC transporter ATPase subunit SufC. (267 aa)    
Predicted Functional Partners:
SDI66223.1
Cysteine desulfurase / selenocysteine lyase; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
  
 0.999
sufB
Fe-S cluster assembly protein SufB.
 
 0.999
SDI66176.1
Fe-S cluster assembly protein SufD.
 
 
 0.998
SDI66252.1
Nitrogen fixation protein NifU.
 
  
 0.984
SDI66090.1
Protein of unknown function.
       0.508
SDI66116.1
EDD domain protein, DegV family.
       0.507
SDI43931.1
Metal-sulfur cluster biosynthetic enzyme.
 
  
 0.491
SDI90440.1
Metal-sulfur cluster biosynthetic enzyme.
 
  
 0.477
Your Current Organism:
Dolosicoccus paucivorans
NCBI taxonomy Id: 84521
Other names: ATCC BAA-56, CCUG 39307, CIP 106314, D. paucivorans, DSM 15742, Streptococcus sp. 2992-95, strain 2992-95
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.