STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALN78688.1Bacterial regulatory, luxR family protein. (215 aa)    
Predicted Functional Partners:
ALN80767.1
Sensory box protein.
   
 0.968
ALN78345.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein.
  
  0.855
ALN78212.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein.
  
  0.843
ALN79951.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein.
  
  0.841
ALN81735.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein.
  
  0.839
ALN78928.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein.
  
  0.817
ALN83090.1
Bacterial regulatory, luxR family protein.
  
     0.774
ALN78211.1
Bacterial regulatory, luxR family protein.
  
     0.769
ALN79952.1
Bacterial regulatory, luxR family protein.
  
     0.765
ALN81734.1
Bacterial regulatory, luxR family protein.
  
     0.765
Your Current Organism:
Lysobacter antibioticus
NCBI taxonomy Id: 84531
Other names: ATCC 29479, DSM 2044, L. antibioticus, LMG 8760, LMG:8760, Lysobacter sp. DWu169, Lysobacter sp. DWu175, UASM 3C
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