Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALN78557.1 | ALN78772.1 | LA76x_0396 | LA76x_0611 | AAA domain protein. | Class II Aldolase and Adducin N-terminal domain protein. | 0.554 |
ALN78557.1 | ALN81521.1 | LA76x_0396 | LA76x_3395 | AAA domain protein. | Oxidoreductase, NAD-binding Rossmann fold family protein. | 0.629 |
ALN78772.1 | ALN78557.1 | LA76x_0611 | LA76x_0396 | Class II Aldolase and Adducin N-terminal domain protein. | AAA domain protein. | 0.554 |
ALN78772.1 | ALN78773.1 | LA76x_0611 | LA76x_0612 | Class II Aldolase and Adducin N-terminal domain protein. | AIG2-like family protein. | 0.517 |
ALN78772.1 | ALN81521.1 | LA76x_0611 | LA76x_3395 | Class II Aldolase and Adducin N-terminal domain protein. | Oxidoreductase, NAD-binding Rossmann fold family protein. | 0.589 |
ALN78772.1 | ALN81596.1 | LA76x_0611 | LA76x_3472 | Class II Aldolase and Adducin N-terminal domain protein. | Phosphorylase superfamily protein; Purine nucleoside phosphorylase which is highly specific for 6-oxopurine nucleosides. Cleaves guanosine or inosine to respective bases and sugar-1-phosphate molecules. Involved in purine salvage. | 0.538 |
ALN78772.1 | ALN81765.1 | LA76x_0611 | LA76x_3643 | Class II Aldolase and Adducin N-terminal domain protein. | glyoxalase/Bleomycin resistance /Dioxygenase superfamily protein. | 0.464 |
ALN78772.1 | ALN82788.1 | LA76x_0611 | LA76x_4685 | Class II Aldolase and Adducin N-terminal domain protein. | hpcH/HpaI aldolase/citrate lyase family protein; Belongs to the HpcH/HpaI aldolase family. | 0.734 |
ALN78772.1 | ALN83034.1 | LA76x_0611 | LA76x_4932 | Class II Aldolase and Adducin N-terminal domain protein. | AAA domain protein. | 0.554 |
ALN78772.1 | mtnA | LA76x_0611 | LA76x_2469 | Class II Aldolase and Adducin N-terminal domain protein. | S-methyl-5-thioribose-1-phosphate isomerase; Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P). | 0.583 |
ALN78772.1 | mtnD | LA76x_0611 | LA76x_3213 | Class II Aldolase and Adducin N-terminal domain protein. | Acireductone dioxygenase; Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway. | 0.673 |
ALN78772.1 | tpiA | LA76x_0611 | LA76x_2989 | Class II Aldolase and Adducin N-terminal domain protein. | Triose-phosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. | 0.531 |
ALN78773.1 | ALN78772.1 | LA76x_0612 | LA76x_0611 | AIG2-like family protein. | Class II Aldolase and Adducin N-terminal domain protein. | 0.517 |
ALN81521.1 | ALN78557.1 | LA76x_3395 | LA76x_0396 | Oxidoreductase, NAD-binding Rossmann fold family protein. | AAA domain protein. | 0.629 |
ALN81521.1 | ALN78772.1 | LA76x_3395 | LA76x_0611 | Oxidoreductase, NAD-binding Rossmann fold family protein. | Class II Aldolase and Adducin N-terminal domain protein. | 0.589 |
ALN81521.1 | ALN83034.1 | LA76x_3395 | LA76x_4932 | Oxidoreductase, NAD-binding Rossmann fold family protein. | AAA domain protein. | 0.629 |
ALN81521.1 | tpiA | LA76x_3395 | LA76x_2989 | Oxidoreductase, NAD-binding Rossmann fold family protein. | Triose-phosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. | 0.624 |
ALN81596.1 | ALN78772.1 | LA76x_3472 | LA76x_0611 | Phosphorylase superfamily protein; Purine nucleoside phosphorylase which is highly specific for 6-oxopurine nucleosides. Cleaves guanosine or inosine to respective bases and sugar-1-phosphate molecules. Involved in purine salvage. | Class II Aldolase and Adducin N-terminal domain protein. | 0.538 |
ALN81596.1 | mtnA | LA76x_3472 | LA76x_2469 | Phosphorylase superfamily protein; Purine nucleoside phosphorylase which is highly specific for 6-oxopurine nucleosides. Cleaves guanosine or inosine to respective bases and sugar-1-phosphate molecules. Involved in purine salvage. | S-methyl-5-thioribose-1-phosphate isomerase; Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P). | 0.972 |
ALN81765.1 | ALN78772.1 | LA76x_3643 | LA76x_0611 | glyoxalase/Bleomycin resistance /Dioxygenase superfamily protein. | Class II Aldolase and Adducin N-terminal domain protein. | 0.464 |
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