Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALN78476.1 | ALN78736.1 | LA76x_0314 | LA76x_0575 | Response regulator. | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein; [T] COG0642 Signal transduction histidine kinase. | 0.914 |
ALN78476.1 | ALN79562.1 | LA76x_0314 | LA76x_1406 | Response regulator. | HAMP domain protein. | 0.875 |
ALN78476.1 | ALN80767.1 | LA76x_0314 | LA76x_2637 | Response regulator. | Sensory box protein. | 0.991 |
ALN78476.1 | ALN83278.1 | LA76x_0314 | LA76x_5176 | Response regulator. | His Kinase A domain protein. | 0.463 |
ALN78736.1 | ALN78476.1 | LA76x_0575 | LA76x_0314 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein; [T] COG0642 Signal transduction histidine kinase. | Response regulator. | 0.914 |
ALN78736.1 | ALN79561.1 | LA76x_0575 | LA76x_1405 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein; [T] COG0642 Signal transduction histidine kinase. | Transcriptional regulatory, C terminal family protein. | 0.910 |
ALN78736.1 | ALN79562.1 | LA76x_0575 | LA76x_1406 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein; [T] COG0642 Signal transduction histidine kinase. | HAMP domain protein. | 0.967 |
ALN78736.1 | ALN80181.1 | LA76x_0575 | LA76x_2041 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein; [T] COG0642 Signal transduction histidine kinase. | Transcriptional regulatory, C terminal family protein; [TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. | 0.915 |
ALN78736.1 | ALN80662.1 | LA76x_0575 | LA76x_2532 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein; [T] COG0642 Signal transduction histidine kinase. | Response regulator. | 0.941 |
ALN78736.1 | ALN80767.1 | LA76x_0575 | LA76x_2637 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein; [T] COG0642 Signal transduction histidine kinase. | Sensory box protein. | 0.999 |
ALN78736.1 | ALN82174.1 | LA76x_0575 | LA76x_4058 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein; [T] COG0642 Signal transduction histidine kinase. | Response regulator. | 0.930 |
ALN78736.1 | ALN82621.1 | LA76x_0575 | LA76x_4513 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein; [T] COG0642 Signal transduction histidine kinase. | Response regulator. | 0.934 |
ALN78736.1 | ALN83278.1 | LA76x_0575 | LA76x_5176 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein; [T] COG0642 Signal transduction histidine kinase. | His Kinase A domain protein. | 0.999 |
ALN79561.1 | ALN78736.1 | LA76x_1405 | LA76x_0575 | Transcriptional regulatory, C terminal family protein. | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein; [T] COG0642 Signal transduction histidine kinase. | 0.910 |
ALN79561.1 | ALN79562.1 | LA76x_1405 | LA76x_1406 | Transcriptional regulatory, C terminal family protein. | HAMP domain protein. | 0.959 |
ALN79561.1 | ALN80767.1 | LA76x_1405 | LA76x_2637 | Transcriptional regulatory, C terminal family protein. | Sensory box protein. | 0.990 |
ALN79561.1 | ALN83278.1 | LA76x_1405 | LA76x_5176 | Transcriptional regulatory, C terminal family protein. | His Kinase A domain protein. | 0.463 |
ALN79562.1 | ALN78476.1 | LA76x_1406 | LA76x_0314 | HAMP domain protein. | Response regulator. | 0.875 |
ALN79562.1 | ALN78736.1 | LA76x_1406 | LA76x_0575 | HAMP domain protein. | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein; [T] COG0642 Signal transduction histidine kinase. | 0.967 |
ALN79562.1 | ALN79561.1 | LA76x_1406 | LA76x_1405 | HAMP domain protein. | Transcriptional regulatory, C terminal family protein. | 0.959 |
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