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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALN79819.1Glucokinase family protein. (313 aa)    
Predicted Functional Partners:
ALN82946.1
Chitobiase/beta-hexosaminidase C-terminal domain protein.
 
 
  0.901
ALN79820.1
SIS domain protein.
 
  
  0.891
nagZ
Beta-hexosaminidase; Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide- linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N- acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides. Belongs to the glycosyl hydrolase 3 family. NagZ subfamily.
    
 0.882
nagA-2
[G] COG1820 N-acetylglucosamine-6-phosphate deacetylase.
 
  
 0.853
ALN80746.1
ROK family protein.
 
     0.764
ALN79821.1
Glycosyl hydrolases 31 family protein.
 
 
 0.761
nagA-3
[G] COG1820 N-acetylglucosamine-6-phosphate deacetylase.
 
  
 0.746
ALN81528.1
Glycosyltransferase 36 associated family protein; [G] COG3459 Cellobiose phosphorylase.
    
 0.700
ALN79247.1
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family.
    
 0.671
ALN79818.1
D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit.
 
     0.648
Your Current Organism:
Lysobacter antibioticus
NCBI taxonomy Id: 84531
Other names: ATCC 29479, DSM 2044, L. antibioticus, LMG 8760, LMG:8760, Lysobacter sp. DWu169, Lysobacter sp. DWu175, UASM 3C
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