STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALN79819.1Glucokinase family protein. (313 aa)    
Predicted Functional Partners:
ALN79820.1
SIS domain protein.
 
  
  0.895
ALN79749.1
Phosphotransferase enzyme family protein.
     
  0.869
nagA-2
[G] COG1820 N-acetylglucosamine-6-phosphate deacetylase.
 
 
 0.856
ALN79821.1
Glycosyl hydrolases 31 family protein.
 
 
 0.825
ALN80746.1
ROK family protein.
 
     0.764
nagA-3
[G] COG1820 N-acetylglucosamine-6-phosphate deacetylase.
 
 
 0.752
ALN78898.1
Dihydrodipicolinate synthetase family protein; Belongs to the DapA family.
  
 
 0.692
pfp
Pyrophosphate-dependent phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP- PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions.
 
  
 0.688
ALN79247.1
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family.
    
 0.686
ALN81515.1
UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
     
 0.684
Your Current Organism:
Lysobacter antibioticus
NCBI taxonomy Id: 84531
Other names: ATCC 29479, DSM 2044, L. antibioticus, LMG 8760, LMG:8760, Lysobacter sp. DWu169, Lysobacter sp. DWu175, UASM 3C
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