STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dltA-5D-alanine--poly(phosphoribitol) ligase, subunit 1. (4563 aa)    
Predicted Functional Partners:
ALN78819.1
Cytochrome P450 family protein.
 
 0.999
ALN80263.1
Amino acid adenylation domain protein; Belongs to the ATP-dependent AMP-binding enzyme family.
 
0.999
dhbB
Isochorismatase; [Q] COG1535 Isochorismate hydrolase.
 
 
 0.999
ALN80825.1
mbtH-like family protein.
 
 0.999
ALN80255.1
AMP-binding enzyme family protein.
0.995
dltA-2
D-alanine--poly(phosphoribitol) ligase, subunit 1.
 
0.993
ALN80266.1
Alpha/beta hydrolase family protein.
 
 
 0.990
dhbF
Dimodular nonribosomal peptide synthase; [Q] COG1020 Non-ribosomal peptide synthetase modules and related proteins.
 
0.982
ALN80256.1
Phosphopantetheine attachment site family protein.
 
 0.974
ALN80260.1
Metallo-beta-lactamase superfamily protein; [R] COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold.
 
 
 0.958
Your Current Organism:
Lysobacter antibioticus
NCBI taxonomy Id: 84531
Other names: ATCC 29479, DSM 2044, L. antibioticus, LMG 8760, LMG:8760, Lysobacter sp. DWu169, Lysobacter sp. DWu175, UASM 3C
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