STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALN80614.1Response regulator. (123 aa)    
Predicted Functional Partners:
ALN80767.1
Sensory box protein.
 
0.991
ALN82188.1
Methyl-accepting chemotaxis (MCP) signaling domain protein.
  
 0.969
ALN82189.1
cheW-like domain protein.
  
 
  0.958
ALN82187.1
Response regulator; [NT] COG0643 Chemotaxis protein histidine kinase and related kinases.
 
0.946
ALN81042.1
Sensory box protein.
 
 0.945
ALN78736.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein; [T] COG0642 Signal transduction histidine kinase.
 
 
 0.942
ALN82190.1
Response regulator.
  
  
 
0.904
ALN79676.1
His Kinase A domain protein.
 
 0.861
ALN78618.1
His Kinase A domain protein.
 
 0.860
ALN79677.1
His Kinase A domain protein.
 
 0.860
Your Current Organism:
Lysobacter antibioticus
NCBI taxonomy Id: 84531
Other names: ATCC 29479, DSM 2044, L. antibioticus, LMG 8760, LMG:8760, Lysobacter sp. DWu169, Lysobacter sp. DWu175, UASM 3C
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