Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALN79080.1 | ALN79343.1 | LA76x_0919 | LA76x_1184 | HAD hydrolase, IA, variant 1 family protein. | Mutator mutT family protein; Belongs to the Nudix hydrolase family. | 0.491 |
ALN79080.1 | nadE | LA76x_0919 | LA76x_1205 | HAD hydrolase, IA, variant 1 family protein. | NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.792 |
ALN79080.1 | nudJ | LA76x_0919 | LA76x_2786 | HAD hydrolase, IA, variant 1 family protein. | NUDIX hydrolase; Belongs to the Nudix hydrolase family. NudJ subfamily. | 0.491 |
ALN79343.1 | ALN79080.1 | LA76x_1184 | LA76x_0919 | Mutator mutT family protein; Belongs to the Nudix hydrolase family. | HAD hydrolase, IA, variant 1 family protein. | 0.491 |
ALN79343.1 | nadE | LA76x_1184 | LA76x_1205 | Mutator mutT family protein; Belongs to the Nudix hydrolase family. | NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.699 |
ALN79343.1 | nudJ | LA76x_1184 | LA76x_2786 | Mutator mutT family protein; Belongs to the Nudix hydrolase family. | NUDIX hydrolase; Belongs to the Nudix hydrolase family. NudJ subfamily. | 0.489 |
ALN80313.1 | nadE | LA76x_2174 | LA76x_1205 | Hydrolyase, tartrate alpha subunit/fumarate, Fe-S type domain protein; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.653 |
ALN80313.1 | nudJ | LA76x_2174 | LA76x_2786 | Hydrolyase, tartrate alpha subunit/fumarate, Fe-S type domain protein; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | NUDIX hydrolase; Belongs to the Nudix hydrolase family. NudJ subfamily. | 0.525 |
ALN80915.1 | clpS | LA76x_2785 | LA76x_2784 | Hypothetical protein. | ATP-dependent Clp protease adapter protein ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family. | 0.585 |
ALN80915.1 | hflD | LA76x_2785 | LA76x_2788 | Hypothetical protein. | Hypothetical protein. | 0.858 |
ALN80915.1 | nudJ | LA76x_2785 | LA76x_2786 | Hypothetical protein. | NUDIX hydrolase; Belongs to the Nudix hydrolase family. NudJ subfamily. | 0.859 |
ALN80915.1 | trmU | LA76x_2785 | LA76x_2787 | Hypothetical protein. | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34. | 0.859 |
ALN82420.1 | fimV | LA76x_4309 | LA76x_3002 | Hypothetical protein. | fimV N-terminal domain. | 0.636 |
ALN82420.1 | nudJ | LA76x_4309 | LA76x_2786 | Hypothetical protein. | NUDIX hydrolase; Belongs to the Nudix hydrolase family. NudJ subfamily. | 0.561 |
clpS | ALN80915.1 | LA76x_2784 | LA76x_2785 | ATP-dependent Clp protease adapter protein ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family. | Hypothetical protein. | 0.585 |
clpS | hflD | LA76x_2784 | LA76x_2788 | ATP-dependent Clp protease adapter protein ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family. | Hypothetical protein. | 0.658 |
clpS | nudJ | LA76x_2784 | LA76x_2786 | ATP-dependent Clp protease adapter protein ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family. | NUDIX hydrolase; Belongs to the Nudix hydrolase family. NudJ subfamily. | 0.720 |
clpS | trmU | LA76x_2784 | LA76x_2787 | ATP-dependent Clp protease adapter protein ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family. | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34. | 0.663 |
fimV | ALN82420.1 | LA76x_3002 | LA76x_4309 | fimV N-terminal domain. | Hypothetical protein. | 0.636 |
fimV | nudJ | LA76x_3002 | LA76x_2786 | fimV N-terminal domain. | NUDIX hydrolase; Belongs to the Nudix hydrolase family. NudJ subfamily. | 0.606 |
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