STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lanMType 2 lantibiotic biosynthesis LanM family protein. (945 aa)    
Predicted Functional Partners:
ALN80140.1
Por secretion system C-terminal sorting domain protein.
  
     0.768
ALN82895.1
Flagellar assembly FliH family protein.
  
     0.743
ALN82694.1
DNA/RNA non-specific endonuclease family protein.
  
    0.719
ALN81242.1
Beta-lytic metalloendopeptidase.
  
     0.718
epaO
Type III secretion apparatus protein, YscQ/HrcQ family.
  
     0.703
ALN78214.1
X-Pro dipeptidyl-peptidase family protein.
  
     0.700
alpha-LP-4
Alpha-lytic protease.
  
     0.669
ALN80418.1
Prolyl oligopeptidase family protein.
  
     0.668
alpha-LP-3
Alpha-lytic protease.
  
     0.666
ALN78518.1
Chitin binding domain protein.
  
     0.651
Your Current Organism:
Lysobacter antibioticus
NCBI taxonomy Id: 84531
Other names: ATCC 29479, DSM 2044, L. antibioticus, LMG 8760, LMG:8760, Lysobacter sp. DWu169, Lysobacter sp. DWu175, UASM 3C
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