STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALN81336.1Phospholipase C, phosphocholine-specific. (694 aa)    
Predicted Functional Partners:
ALN81763.1
Phospholipase C, phosphocholine-specific.
  
  
 
0.907
cls
Cardiolipin synthase; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol; Belongs to the phospholipase D family. Cardiolipin synthase subfamily.
     
 0.900
ALN82963.1
Phospholipase D family protein.
     
 0.900
ALN81482.1
Phospholipase D family protein.
     
 0.575
ALN81761.1
Rieske [2Fe-2S] domain protein.
   
 
  0.518
ALN82327.1
Hypothetical protein.
    
 0.511
ALN81197.1
Hypothetical protein.
  
     0.505
ALN78658.1
Putative vanillate O-demethylase oxygenase subunit.
  
  
  0.504
fuc1
alpha-L-fucosidase 1.
  
     0.474
ALN79546.1
Hypothetical protein.
  
  
  0.464
Your Current Organism:
Lysobacter antibioticus
NCBI taxonomy Id: 84531
Other names: ATCC 29479, DSM 2044, L. antibioticus, LMG 8760, LMG:8760, Lysobacter sp. DWu169, Lysobacter sp. DWu175, UASM 3C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.