Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALN83268.1 | ALN83269.1 | LA76x_5166 | LA76x_5167 | Hypothetical protein. | Hypothetical protein. | 0.773 |
ALN83268.1 | ALN83270.1 | LA76x_5166 | LA76x_5168 | Hypothetical protein. | Bacterial regulatory helix-turn-helix, lysR family protein; Belongs to the LysR transcriptional regulatory family. | 0.572 |
ALN83268.1 | ALN83271.1 | LA76x_5166 | LA76x_5169 | Hypothetical protein. | Methyltransferase domain protein. | 0.434 |
ALN83269.1 | ALN83268.1 | LA76x_5167 | LA76x_5166 | Hypothetical protein. | Hypothetical protein. | 0.773 |
ALN83269.1 | ALN83270.1 | LA76x_5167 | LA76x_5168 | Hypothetical protein. | Bacterial regulatory helix-turn-helix, lysR family protein; Belongs to the LysR transcriptional regulatory family. | 0.572 |
ALN83269.1 | ALN83271.1 | LA76x_5167 | LA76x_5169 | Hypothetical protein. | Methyltransferase domain protein. | 0.434 |
ALN83270.1 | ALN83268.1 | LA76x_5168 | LA76x_5166 | Bacterial regulatory helix-turn-helix, lysR family protein; Belongs to the LysR transcriptional regulatory family. | Hypothetical protein. | 0.572 |
ALN83270.1 | ALN83269.1 | LA76x_5168 | LA76x_5167 | Bacterial regulatory helix-turn-helix, lysR family protein; Belongs to the LysR transcriptional regulatory family. | Hypothetical protein. | 0.572 |
ALN83270.1 | ALN83271.1 | LA76x_5168 | LA76x_5169 | Bacterial regulatory helix-turn-helix, lysR family protein; Belongs to the LysR transcriptional regulatory family. | Methyltransferase domain protein. | 0.591 |
ALN83271.1 | ALN83268.1 | LA76x_5169 | LA76x_5166 | Methyltransferase domain protein. | Hypothetical protein. | 0.434 |
ALN83271.1 | ALN83269.1 | LA76x_5169 | LA76x_5167 | Methyltransferase domain protein. | Hypothetical protein. | 0.434 |
ALN83271.1 | ALN83270.1 | LA76x_5169 | LA76x_5168 | Methyltransferase domain protein. | Bacterial regulatory helix-turn-helix, lysR family protein; Belongs to the LysR transcriptional regulatory family. | 0.591 |