STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYNW0133Conserved hypothetical. (341 aa)    
Predicted Functional Partners:
SYNW0870
Conserved hypothetical.
  
  
 0.783
SYNW2277
Conserved hypothetical protein; Predicted membrane protein.
  
   
 0.783
SYNW1231
Conserved hypothetical protein.
  
     0.773
SYNW1488
Conserved hypothetical protein.
  
    0.773
SYNW0265
Conserved hypothetical protein.
  
     0.767
SYNW1221
Conserved hypothetical protein.
  
     0.766
SYNW1001
Conserved hypothetical protein.
  
     0.765
SYNW1507
Conserved hypothetical protein.
  
     0.764
SYNW1850
Conserved hypothetical protein.
  
     0.762
SYNW0775
Conserved hypothetical protein; Unclear why Thermosynechococcus database called it a response regulator.
  
     0.758
Your Current Organism:
Synechococcus sp. WH 8102
NCBI taxonomy Id: 84588
Other names: S. sp. WH 8102, Synechococcus sp. WH8102
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.