STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYNW0174Possible glycosyltransferase family 1. (393 aa)    
Predicted Functional Partners:
SYNW0175
Possible glycosyltransferase.
 
    0.801
SYNW0178
Possible glycosyltransferase.
  
    0.775
SYNW0173
Putative multidrug efflux ABC transporter.
       0.773
SYNW0176
Conserved hypothetical protein.
       0.773
SYNW0177
Possible glycosyltransferase group 1.
       0.773
SYNW0179
Conserved hypothetical protein.
       0.773
ho1
Heme oxygenase.
   
   0.586
SYNW0172
Conserved hypothetical protein.
       0.565
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.472
SYNW0170
Conserved hypothetical protein.
       0.422
Your Current Organism:
Synechococcus sp. WH 8102
NCBI taxonomy Id: 84588
Other names: S. sp. WH 8102, Synechococcus sp. WH8102
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