STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYNW0564Conserved hypothetical protein. (184 aa)    
Predicted Functional Partners:
SYNW0563
Conserved hypothetical protein.
       0.809
SYNW0565
Hypothetical.
       0.773
SYNW0566
Possible two-component response regulator.
       0.773
SYNW0272
Conserved hypothetical protein.
  
     0.764
SYNW2061
Conserved hypothetical protein.
  
     0.757
SYNW0526
Conserved hypothetical protein.
  
     0.742
pilC
Pili biogenesis protein.
  
  
 0.740
SYNW0331
Conserved hypothetical protein.
  
     0.739
SYNW1828
Conserved hypothetical protein.
  
     0.737
SYNW0408
Conserved hypothetical protein.
 
     0.731
Your Current Organism:
Synechococcus sp. WH 8102
NCBI taxonomy Id: 84588
Other names: S. sp. WH 8102, Synechococcus sp. WH8102
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.