STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYNW0807Two-component sensor histidine kinase. (444 aa)    
Predicted Functional Partners:
SYNW0808
Two-component response regulator.
 
 0.997
SYNW0671
Putative dihydrolipoamide acetyltransferase component (E2) of pyruvate dehydrogenase complex.
    
 0.819
SYNW0126
Two-component response regulator.
 
 
 0.818
phoB
Two-component response regulator, phosphate.
 
 
 0.818
SYNW1875
Two-component response regulator.
 
 
 0.818
rpaB
Two-component response regulator.
 
 
 0.811
SYNW0904
Two-component response regulator.
 
 
 0.809
rpaA
Two-component response regulator.
 
 
 0.799
SYNW1598
Missing some conserved amino acids thought to be involved in response regulator functioning.
 
 
 0.797
kaiB
Possible circadian oscillation regulator KaiB; Component of the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. The KaiABC complex may act as a promoter-non-specific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction. In the complex, it decreases the phosphorylation status of KaiC. It has no effect on KaiC by itself, but instead needs the presence of both KaiA and KaiC, suggesting that it acts by antagonizing the interaction between KaiA and KaiC; Belongs to the KaiB family.
   
 
 0.674
Your Current Organism:
Synechococcus sp. WH 8102
NCBI taxonomy Id: 84588
Other names: S. sp. WH 8102, Synechococcus sp. WH8102
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.