Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
SYNW0809Conserved hypothetical protein. (153 aa)    
Predicted Functional Partners:
SYNW0877
Putative histone deacetylase/AcuC/AphA family protein.
    
 0.818
SYNW1625
FKBP-type peptidyl-prolyl cis-trans isomerase (PPIase).
   
 
 0.808
SYNW1078
Conserved hypothetical protein.
   
 0.790
ndk
Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.
   
 
 0.772
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
    
 0.771
SYNW0522
Hypothetical.
    
 0.761
SYNW2483
Conserved hypothetical protein.
    
 
 0.755
adk
Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.
    
 
 0.697
SYNW2059
Conserved hypothetical protein.
    
 0.629
cbbX
Probable RuBisCo-expression protein CbbX.
    
 0.603
Your Current Organism:
Synechococcus sp. WH 8102
NCBI taxonomy Id: 84588
Other names: S. sp. WH 8102, Synechococcus sp. WH8102
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