STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYNW0841ABC transporter for amino acids, membrane component. (296 aa)    
Predicted Functional Partners:
SYNW0842
ABC transporter for amino acids, membrane component.
 
0.998
SYNW0843
ABC transporter for amino acids, ATP binding component.
 
 
 0.996
SYNW0840
ABC transporter, substrate binding protein for amino acids.
 
 
 0.992
SYNW0839
Putative sulfate transporter.
       0.456
SYNW0709
ABC transporter, substrate binding protein, possibly oligopeptides.
  
 
  0.444
SYNW0838
Conserved hypothetical protein.
  
    0.405
Your Current Organism:
Synechococcus sp. WH 8102
NCBI taxonomy Id: 84588
Other names: S. sp. WH 8102, Synechococcus sp. WH8102
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.