STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
furFerric uptake regulator family; Belongs to the Fur family. (151 aa)    
Predicted Functional Partners:
SYNW0774
Ferric uptake regulation protein; Belongs to the Fur family.
  
     0.713
rpoA
RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
   0.661
SYNW2401
Ferric uptake regulator family; Poorer E val than the other fur family protein; Belongs to the Fur family.
  
     0.622
SYNW0866
Conserved hypothetical.
       0.557
SYNW0867
Conserved hypothetical protein.
       0.557
icc
Possible ICC (3',5'-cyclic-nucleotide phosphodiesterase) protein homolog; Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes.
       0.557
SYNW0317
Conserved hypothetical protein.
  
    0.543
SYNW0687
Putative thioredoxin reductase.
  
 
 0.534
glsF,
Ferredoxin-dependent glutamate synthase, Fd-GOGAT.
     
 0.529
hflX
Putative GTP-binding protein, transporter associated; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis.
  
  
 0.515
Your Current Organism:
Synechococcus sp. WH 8102
NCBI taxonomy Id: 84588
Other names: S. sp. WH 8102, Synechococcus sp. WH8102
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