Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SYNW0959Putative multidrug efflux ABC transporter. (1007 aa)    
Predicted Functional Partners:
SYNW0958
Similar to leukotoxin secretion protein.
 
 
 0.960
SYNW0411
Putative multidrug efflux ABC transporter.
 
  
0.921
SYNW0193
Putative multidrug efflux ABC transporter.
 
  
0.915
SYNW0960
Conserved hypothetical protein.
 
   
 0.879
SYNW0410
Possible effux transporter.
 
 
 0.797
SYNW0194
Possible similar to leukotoxin secretion protein.
 
 
 0.775
SYNW0192
Conserved hypothetical protein.
 
   
 0.759
SYNW0408
Conserved hypothetical protein.
 
   
 0.747
swmA
SwmA-cell surface protein required for swimming motility; Citation: Brahamsha (1996) Proc. Natl. Acad. Sci. USA 93:6504-6509.
 
  
 0.664
glsF,
Ferredoxin-dependent glutamate synthase, Fd-GOGAT.
     
 0.652
Your Current Organism:
Synechococcus sp. WH 8102
NCBI taxonomy Id: 84588
Other names: S. sp. WH 8102, Synechococcus sp. WH8102
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