STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYNW1417ABC transporter, nitrate-like, ATP binding component. (251 aa)    
Predicted Functional Partners:
SYNW1416
ABC transporter, nitrate-like.
 
 
 0.997
SYNW1415
ABC transporter, nitrate-like substrate binding protein.
 
  
 0.973
SYNW2487
Putative cyanate ABC transporter.
  
 0.952
SYNW2486
Putative cyanate ABC transporter.
  
 0.918
SYNW1299
Possible ABC transporter.
 
      0.878
SYNW1418
Putative Rieske [2Fe-2S] family protein.
       0.773
SYNW1412
Putative agmatine ureohydrolase; Belongs to the arginase family.
 
     0.653
hypB
Hydrogenase expression/formation protein HypB.
       0.651
hypA2
Putative hydrogenase expression/formation protein HypA2.
     
 0.597
SYNW0217
ABC transporter, ATP binding component.
  
     0.458
Your Current Organism:
Synechococcus sp. WH 8102
NCBI taxonomy Id: 84588
Other names: S. sp. WH 8102, Synechococcus sp. WH8102
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.