STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYNW1517Conserved hypothetical protein. (89 aa)    
Predicted Functional Partners:
SYNW1518
Conserved hypothetical protein.
 
     0.798
SYNW1489
Conserved hypothetical protein; Predicted membrane protein.
  
     0.713
SYNW1024
Conserved hypothetical protein.
  
     0.700
ndhO
Conserved hypothetical protein; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration.
  
     0.689
SYNW0829
Conserved hypothetical protein.
  
     0.640
SYNW2103
Conserved hypothetical protein; Multigene family.
 
     0.625
SYNW2150
Conserved hypothetical protein.
  
     0.622
SYNW0172
Conserved hypothetical protein.
  
     0.617
SYNW0527
Conserved hypothetical protein.
  
     0.616
SYNW0836
Conserved hypothetical protein.
  
     0.612
Your Current Organism:
Synechococcus sp. WH 8102
NCBI taxonomy Id: 84588
Other names: S. sp. WH 8102, Synechococcus sp. WH8102
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.