STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYNW1531Conserved hypothetical protein; Similar to orf in PCC7942. (501 aa)    
Predicted Functional Partners:
SYNW1527
Conserved hypothetical protein.
 
     0.942
SYNW1526
Conserved hypothetical protein; Predicted membrane protein (COG4244).
 
     0.940
coxB,
Possible cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
 
     0.870
SYNW2483
Conserved hypothetical protein.
    
 0.843
coxC,
Possible cytochrome c oxidase subunit III.
 
     0.831
coxA,
Cytochrome c oxidase subunit I; Belongs to the heme-copper respiratory oxidase family.
       0.799
SYNW1609
Conserved hypothetical protein.
  
     0.555
SYNW1522
Conserved hypothetical protein.
 
   
 0.548
SYNW2228
Conserved hypothetical protein; Found in MIT9313 and Trichodesmium. Similar to SYNW2231.
  
     0.485
cpeY
Putative bilin biosynthesis protein (CpeY).
 
     0.481
Your Current Organism:
Synechococcus sp. WH 8102
NCBI taxonomy Id: 84588
Other names: S. sp. WH 8102, Synechococcus sp. WH8102
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.