STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYNW1812Conserved hypothetical protein. (168 aa)    
Predicted Functional Partners:
SYNW1813
Possible phosphoribosyltransferase family protein.
     
 0.813
SYNW1128
Conserved hypothetical protein.
  
     0.627
SYNW2228
Conserved hypothetical protein; Found in MIT9313 and Trichodesmium. Similar to SYNW2231.
  
     0.619
SYNW2231
Conserved hypothetical protein; Found in MIT9313. Possible COG3463 membrane protein.
  
     0.615
SYNW0706
Possible multidrug efflux transporter, MFS family.
  
     0.592
SYNW1609
Conserved hypothetical protein.
  
     0.571
psbT
Photosystem II reaction center T protein; Seems to play a role in the dimerization of PSII. Belongs to the PsbT family.
  
     0.566
SYNW1814
Conserved hypothetical protein.
       0.560
SYNW1333
Conserved hypothetical.
  
     0.539
SYNW1452
Predicted membrane protein (COG2259).
  
     0.511
Your Current Organism:
Synechococcus sp. WH 8102
NCBI taxonomy Id: 84588
Other names: S. sp. WH 8102, Synechococcus sp. WH8102
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.