STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYNW1827Putative Na+/H+ antiporter, CPA1 family. (421 aa)    
Predicted Functional Partners:
SYNW1828
Conserved hypothetical protein.
       0.793
SYNW1829
Conserved hypothetical protein.
       0.784
nfrC
UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
       0.774
SYNW0809
Conserved hypothetical protein.
   
 0.761
SYNW2501
Putative chloride channel.
 
  
 0.594
SYNW1525
Putative CaCA family, sodium/calcium exchanger.
 
 
 
 0.585
pilT2A
Homologous to N-terminus of PilT2 protein.
       0.547
SYNW0925
Possible Na+/H+ antiporter, CPA2 family.
   
 
 0.538
pilT2B
Homologous to C-terminus of pilT2 protein.
       0.481
SYNW1078
Conserved hypothetical protein.
   
 0.478
Your Current Organism:
Synechococcus sp. WH 8102
NCBI taxonomy Id: 84588
Other names: S. sp. WH 8102, Synechococcus sp. WH8102
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.