STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYNW1850Conserved hypothetical protein. (277 aa)    
Predicted Functional Partners:
psaF
Photosystem I reaction center subunit III (PsaF).
  
   0.783
SYNW1231
Conserved hypothetical protein.
 
     0.774
SYNW0139
Conserved hypothetical protein.
  
     0.773
SYNW1277
Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
 
   0.773
SYNW0265
Conserved hypothetical protein.
  
     0.772
SYNW0870
Conserved hypothetical.
 
   
 0.772
SYNW2277
Conserved hypothetical protein; Predicted membrane protein.
  
     0.772
SYNW1296
Conserved hypothetical protein.
  
     0.771
SYNW0946
Conserved hypothetical protein; Predicted membrane protein.
  
     0.770
SYNW1624
Conserved hypothetical protein; Changed start to match that seen in other orgs.
  
     0.769
Your Current Organism:
Synechococcus sp. WH 8102
NCBI taxonomy Id: 84588
Other names: S. sp. WH 8102, Synechococcus sp. WH8102
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.