STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYNW1954Putative glycerol-3-phosphate dehydrogenase. (525 aa)    
Predicted Functional Partners:
SYNW1953
Putative glycerol kinase; Belongs to the FGGY kinase family.
 
 0.998
plsY
Conserved hypothetical membrane protein; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.
     
 0.917
plsC
Putative 1-acyl-sn-glycerol-3-phosphate acyltransferase.
  
 
 0.818
dgkA
Possible diacylglycerol kinase.
    
  0.800
SYNW1952
Putative glycosyl hydrolase family.
     
 0.566
SYNW0163
Putative glycolate oxidase subunit (Fe-S) protein.
  
  
 0.443
pykF
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
  
 0.415
SYNW1988
Putative carbohydrate kinase, FGGY family.
  
  
 0.404
tpiA,
Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
   
 
 0.402
Your Current Organism:
Synechococcus sp. WH 8102
NCBI taxonomy Id: 84588
Other names: S. sp. WH 8102, Synechococcus sp. WH8102
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