Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SYNW1990Conserved hypothetical protein. (91 aa)    
Predicted Functional Partners:
SYNW1991
Conserved hypothetical protein.
       0.681
SYNW1534
Conserved hypothetical protein.
  
     0.650
SYNW2328
Conserved hypothetical protein.
  
   
 0.571
SYNW0300
Conserved hypothetical protein.
  
     0.558
SYNW1821
Conserved hypothetical protein.
  
     0.554
SYNW2032
Conserved hypothetical protein.
  
     0.540
SYNW1823
Conserved hypothetical protein.
  
     0.539
SYNW0518
Conserved hypothetical protein; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.
  
     0.538
psaK
Possible photosystem I reaction center subunit X (PsaK).
  
     0.488
SYNW1758
Conserved hypothetical protein.
  
     0.441
Your Current Organism:
Synechococcus sp. WH 8102
NCBI taxonomy Id: 84588
Other names: S. sp. WH 8102, Synechococcus sp. WH8102
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