STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mpeCC-phycoerythrin class II gamma chain, linker polypeptide; Belongs to the phycobilisome linker protein family. (293 aa)    
Predicted Functional Partners:
cpeC
Phycobilisome linker polypeptide; Belongs to the phycobilisome linker protein family.
  
  
 
0.925
mpeB
C-phycoerythrin class II beta chain; Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex.
 
   
 0.866
mpeA
C-phycoerythrin class II alpha chain; Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex.
 
     0.856
cpeA
C-phycoerythrin class I alpha chain.
  
   
 0.803
mpeU
Bilin biosynthesis protein MpeU (PBS lyase HEAT-like repeat).
 
     0.799
apcC
Linker polypeptide, allophycocyanin-associated; Rod linker protein, associated with allophycocyanin. Linker polypeptides determine the state of aggregation and the location of the disk-shaped phycobiliprotein units within the phycobilisome and modulate their spectroscopic properties in order to mediate a directed and optimal energy transfer.
  
     0.774
apcB
Allophycocyanin beta chain.
  
     0.774
apcA
Allophycocyanin alpha chain.
  
     0.774
apcF
Phycobilisome core component-allophycocyanin beta-18 subunit.
  
     0.774
apcD
Allophycocyanin alpha-B chain.
  
     0.774
Your Current Organism:
Synechococcus sp. WH 8102
NCBI taxonomy Id: 84588
Other names: S. sp. WH 8102, Synechococcus sp. WH8102
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