Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
mpeCC-phycoerythrin class II gamma chain, linker polypeptide; Belongs to the phycobilisome linker protein family. (293 aa)    
Predicted Functional Partners:
cpeC
Phycobilisome linker polypeptide; Belongs to the phycobilisome linker protein family.
  
  
0.928
mpeB
C-phycoerythrin class II beta chain; Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex.
 
   
 0.883
mpeA
C-phycoerythrin class II alpha chain; Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex.
 
   
 0.867
mpeU
Bilin biosynthesis protein MpeU (PBS lyase HEAT-like repeat).
 
   
 0.831
cpeA
C-phycoerythrin class I alpha chain.
  
   
 0.828
apcC
Linker polypeptide, allophycocyanin-associated; Rod linker protein, associated with allophycocyanin. Linker polypeptides determine the state of aggregation and the location of the disk-shaped phycobiliprotein units within the phycobilisome and modulate their spectroscopic properties in order to mediate a directed and optimal energy transfer.
  
   
 0.808
apcB
Allophycocyanin beta chain.
  
   
 0.808
rpcA
R-phycocyanin II alpha chain.
  
   
 0.808
cpcS
Conserved hypothetical protein; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins.
  
   
 0.807
cpcS-3
Conserved hypothetical protein; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins.
  
   
 0.807
Your Current Organism:
Synechococcus sp. WH 8102
NCBI taxonomy Id: 84588
Other names: S. sp. WH 8102, Synechococcus sp. WH8102
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