STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mpeUBilin biosynthesis protein MpeU (PBS lyase HEAT-like repeat). (301 aa)    
Predicted Functional Partners:
cpeZ
Putative bilin biosynthesis protein cpeZ.
  
   
 0.926
cpeY
Putative bilin biosynthesis protein (CpeY).
 
   
 0.920
SYNW2007
Similar to cpeY.
 
   
 0.829
mpeA
C-phycoerythrin class II alpha chain; Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex.
 
   
 0.827
pebB
Phycoerythrobilin:ferredoxin oxidoreductase; Catalyzes the two-electron reduction of the C2 and C3(1) diene system of 15,16-dihydrobiliverdin; Belongs to the HY2 family.
  
   
 0.821
cpeC
Phycobilisome linker polypeptide; Belongs to the phycobilisome linker protein family.
  
   
 0.818
cpcS-3
Conserved hypothetical protein; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins.
  
   
 0.818
pebA
15,16 dihydrobiliverdin:ferredoxin oxidoreductase; Catalyzes the two-electron reduction of biliverdin IX-alpha at the C15 methine bridge; Belongs to the HY2 family.
  
   
 0.809
mpeB
C-phycoerythrin class II beta chain; Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex.
 
   
 0.799
mpeC
C-phycoerythrin class II gamma chain, linker polypeptide; Belongs to the phycobilisome linker protein family.
 
     0.799
Your Current Organism:
Synechococcus sp. WH 8102
NCBI taxonomy Id: 84588
Other names: S. sp. WH 8102, Synechococcus sp. WH8102
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