Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
acnBAconitate hydratase B; Belongs to the aconitase/IPM isomerase family. (860 aa)    
Predicted Functional Partners:
icd
Isocitrate dehydrogenase.
  
 
 0.990
gltA
Citrate synthase; Belongs to the citrate synthase family.
  
 
 0.964
SYNW2501
Putative chloride channel.
       0.818
aroF
DAHP synthetase class I; Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D-arabino- heptulosonate-7-phosphate (DAHP).
       0.622
SYNW2502
Conserved hypothetical protein.
       0.574
glsF,
Ferredoxin-dependent glutamate synthase, Fd-GOGAT.
      
 0.566
SYNW0590
Possible succinate dehydrogenase iron-sulfur protein.
  
  
 0.559
purB
Fumarate lyase:Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
     
 0.545
atpA
ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family.
   
  
 0.432
SYNW0671
Putative dihydrolipoamide acetyltransferase component (E2) of pyruvate dehydrogenase complex.
   
  
 0.416
Your Current Organism:
Synechococcus sp. WH 8102
NCBI taxonomy Id: 84588
Other names: S. sp. WH 8102, Synechococcus sp. WH8102
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