STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROHU_013788Synaptosomal-associated 29. (150 aa)    
Predicted Functional Partners:
ROHU_004993
Syntaxin-17 isoform X1.
    
 0.994
ROHU_008504
Vesicle-associated membrane 7; Belongs to the synaptobrevin family.
    
 0.981
ROHU_020152
Beclin 1-associated autophagy-related key regulator-like isoform X1.
    
 0.939
ROHU_010404
Vesicle-associated membrane 8-like protein.
   
 0.937
ROHU_016371
Syntaxin-7; Belongs to the G-protein coupled receptor 1 family.
    
 0.861
ROHU_036019
Membrane progestin receptor alpha-B-like protein; Belongs to the syntaxin family.
    
 0.861
ROHU_006479
Vesicle-associated membrane 3.
   
 0.830
ROHU_024826
Sec1 family domain-containing 1; Belongs to the G-protein coupled receptor 1 family. Opsin subfamily.
    
 0.820
ROHU_033128
Vesicle-associated membrane 2-like protein.
   
 0.817
ROHU_000262
Vesicle-associated membrane 2.
   
 0.817
Your Current Organism:
Labeo rohita
NCBI taxonomy Id: 84645
Other names: Cyprinus rohita, Jayanti rohu, L. rohita, rohu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.