STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROHU_013448Retinol-binding 1. (126 aa)    
Predicted Functional Partners:
ROHU_015365
NAD-dependent deacetylase sirtuin-2 isoform X1.
    
  0.759
ROHU_026103
5-nucleotidase-like protein; Belongs to the 5'-nucleotidase family.
     
 0.737
ROHU_029659
Lecithin retinol acyltransferase-like protein.
     
 0.684
ROHU_012368
Lecithin retinol acyltransferase-like protein.
     
 0.683
ROHU_030401
Lecithin retinol acyltransferase-like protein.
     
 0.683
ROHU_026463
NAD-dependent deacetylase sirtuin-3-like protein.
    
  0.657
ROHU_026728
NAD-dependent protein deacetylase; NAD-dependent protein deacetylase.
    
  0.657
SIRT5
NAD-dependent protein deacylase sirtuin-5, mitochondrial; NAD-dependent lysine demalonylase, desuccinylase and deglutarylase that specifically removes malonyl, succinyl and glutaryl groups on target proteins. Has weak NAD-dependent protein deacetylase activity; however this activity may not be physiologically relevant in vivo.
    
  0.637
SIRT5-2
NAD-dependent protein deacylase sirtuin-5, mitochondrial; NAD-dependent lysine demalonylase, desuccinylase and deglutarylase that specifically removes malonyl, succinyl and glutaryl groups on target proteins. Has weak NAD-dependent protein deacetylase activity; however this activity may not be physiologically relevant in vivo.
    
  0.637
ROHU_027519
Nicotinamide riboside kinase 2-like protein.
   
 
  0.621
Your Current Organism:
Labeo rohita
NCBI taxonomy Id: 84645
Other names: Cyprinus rohita, Jayanti rohu, L. rohita, rohu
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