STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROHU_033820Cytosol aminopeptidase. (522 aa)    
Predicted Functional Partners:
ROHU_026356
Aspartate aminotransferase.
   
 0.900
ROHU_030563
Aspartate aminotransferase.
   
 0.887
ROHU_025225
Aspartate cytoplasmic-like protein.
   
 0.887
ROHU_026361
Aminopeptidase.
  
 0.853
ROHU_030689
Kynurenine--oxoglutarate transaminase 1 isoform X1.
  
  0.847
ROHU_028849
Kynurenine--oxoglutarate transaminase 3.
  
  0.847
ROHU_013921
Aminopeptidase N-like protein.
  
 0.846
ROHU_016096
Aminopeptidase.
  
  
 
0.845
ROHU_017417
Glutathione synthetase.
     
 0.840
ROHU_031259
Gamma-glutamylcyclotransferase; Catalyzes the cleavage of glutathione into 5-oxo-L-proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides; Belongs to the gamma-glutamylcyclotransferase family.
     
 0.839
Your Current Organism:
Labeo rohita
NCBI taxonomy Id: 84645
Other names: Cyprinus rohita, Jayanti rohu, L. rohita, rohu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.