Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ROHU_013814CYR61-like protein. (364 aa)    
Predicted Functional Partners:
ROHU_022309
Connective tissue growth factor-like protein.
   
  
 0.869
ROHU_025756
Angiomotin 2.
   
  
 0.750
ROHU_026096
Serine threonine-kinase LATS1.
      
 0.710
ROHU_010908
Transcriptional enhancer factor TEF-1-like protein.
   
 
 0.658
ROHU_033901
Extracellular serine threonine kinase FAM20C-like protein.
     
 0.644
ROHU_033640
Salvador-like protein.
      
 0.630
ROHU_008054
Angiomotin-like 2a.
   
  
 0.625
ROHU_019524
Angiomotin-like isoform X1.
      
 0.569
ROHU_007844
Serine threonine-kinase LATS2-like protein.
      
 0.567
ROHU_006097
WW domain-containing transcription regulator 1.
   
  
 0.538
Your Current Organism:
Labeo rohita
NCBI taxonomy Id: 84645
Other names: Cyprinus rohita, Jayanti rohu, L. rohita, rohu
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