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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROHU_021619C-C chemokine receptor type 4-like protein; Belongs to the G-protein coupled receptor 1 family. (353 aa)    
Predicted Functional Partners:
ROHU_010035
C-C motif chemokine 4-like protein.
    
 0.805
ROHU_006561
C-C chemokine receptor type 4-like protein; Belongs to the G-protein coupled receptor 1 family.
  
  
 
0.787
ROHU_032978
C-C motif chemokine 8-like protein.
    
  0.782
ROHU_002206
Uncharacterized protein.
    
  0.726
ROHU_012097
G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily.
    
  0.716
ROHU_026783
G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily.
    
  0.716
ROHU_012835
G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily.
    
  0.700
ROHU_003104
G-coupled receptor kinase 5-like isoform X1.
    
  0.700
ROHU_012712
Monocyte chemotactic 1B-like protein.
    
  0.684
ROHU_024159
Arrestin red cell-like protein.
    
  0.661
Your Current Organism:
Labeo rohita
NCBI taxonomy Id: 84645
Other names: Cyprinus rohita, Jayanti rohu, L. rohita, rohu
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